Insertion junction: CLIP2.053421_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053421
Chromosome:chromosome 9
Location:3090410
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394028 (1 of 21) IPR000679 - Zinc finger, GATA-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCATCACCACCGCGCTCCGCACGCGCCGATGTTGTGCTCTTCTTTTG
Internal bar code:TTTGTTACTCCGGTTCCATCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5103
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGGGTATCTCAGCTTTCG
Suggested primer 2:GAACCTGTTGCTGTTGCTGG