Insertion junction: CLIP2.053438_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053438
Chromosome:chromosome 17
Location:5506290
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739300 (1 of 1) PTHR30615//PTHR30615:SF1 - UNCHARACTERIZED PROTEIN YJBQ-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTTCGGTTTAGTTTGGGCTGGTATTTGCAACCCCCACCTCGGGCACTG
Internal bar code:CGGTGAGACAAGGTCCGTAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:222
LEAP-Seq percent confirming:26.4706
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGATACAAAGTGGGGCTT
Suggested primer 2:TCAGCACAGTCAGAGCACAG