Insertion junction: CLIP2.053438_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.053438
Chromosome:chromosome 17
Location:5506293
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739300 (1 of 1) PTHR30615//PTHR30615:SF1 - UNCHARACTERIZED PROTEIN YJBQ-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAATGCAATAGAGCGAGGAGGAGAGCGTGGGGGGTGGGGGGCCAGCCG
Internal bar code:CGGTGAGACAAGGTCCGTAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:336
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGCACAGTCAGAGCACAG
Suggested primer 2:CCGGATACAAAGTGGGGCTT