Insertion junction: CLIP2.053455_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.053455
Chromosome:chromosome 3
Location:698854
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145827 subtilisin-like Type II membrane endoprotease; (1 of 1) IPR000209//IPR003882//IPR015500 - Peptidase S8/S53 domain // Pistil-specific extensin-like protein // Peptidase S8, subtilisin-related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGAAGCCCGGGAGGCGCGTGTTGCTGGACATCAGAGCCCCGCTGGGGT
Internal bar code:CGAGGGTGTCACGGAGAGATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:596
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTAGCAGTATCGACGCT
Suggested primer 2:CGGTACCCGCTGTATGATCC