Insertion junction: CLIP2.053455_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053455
Chromosome:chromosome 3
Location:698862
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145827 subtilisin-like Type II membrane endoprotease; (1 of 1) IPR000209//IPR003882//IPR015500 - Peptidase S8/S53 domain // Pistil-specific extensin-like protein // Peptidase S8, subtilisin-related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAAGCCCCCTACCCAGATGGCTTTCCCACGCGACCCGCCGCTTCCTTGC
Internal bar code:TTGTCTTGGGTTTTCCAAAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:167
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTACCCGCTGTATGATCC
Suggested primer 2:GCACTAGCAGTATCGACGCT