Insertion junction: CLIP2.053468_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053468
Chromosome:chromosome 6
Location:106219
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g249700 (1 of 1) IPR003690//IPR017956//IPR020478 - Mitochodrial transcription termination factor // AT hook, DNA-binding motif // AT hook-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGCTCAGCTCGTGGCGCCTGGCAGGGCGTAAGAGGATCAGGGGGGTTG
Internal bar code:GTGTAAAGGGTTTGCTAGAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:521
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTGTTGTTACGCAGTCT
Suggested primer 2:GAATCCTCCAGGCTCAGCTC