Insertion junction: CLIP2.053474_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053474
Chromosome:plastome
Location:121721
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreCp.g802313 rbcL,ChreCp049,2717040 (1 of 1) K01601 - ribulose-bisphosphate carboxylase large chain (rbcL); RuBisCO large subunit CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGACAAACTTTAATTTTTATTTTTCATGATGTTTATGTGAATAGCATA
Internal bar code:TCCGGCGAAGTAACGAACAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:240
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TATACGTGCGACCCGATGTG
Suggested primer 2:ACAACCATTCATGCGTTGGC