Insertion junction: CLIP2.053475_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.053475
Chromosome:chromosome 13
Location:776841
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g566900 (1 of 1) PTHR11289:SF0 - BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAGCGGCGGCACCGGGCCGGTGACTGACGGCGGCAGCGGTGCCAGGCC
Internal bar code:CTAAGGCTTCAATGATCCTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:644
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCAAGCTTGGCAAACAGC
Suggested primer 2:CAGTGTTGCAATGCTCCAGG