Insertion junction: CLIP2.053483_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053483
Chromosome:chromosome 1
Location:8067693
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g062902 (1 of 1) K15148 - mediator of RNA polymerase II transcription subunit 7 (MED7) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTTGTGTGCGCCCCCGCCCACATCGTCGTCCTCGATCACAATCCGCTT
Internal bar code:CGTCAGAGTTTATACGCTGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:178
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGCTCACCAACATGCTA
Suggested primer 2:AATGCACCGAAGACTGCAGA