Insertion junction: CLIP2.053485_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.053485
Chromosome:chromosome 6
Location:1858300
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g263850 PPT2,TPT2,TPT20 Triose phosphate/phosphate translocator; (1 of 2) PTHR11132:SF70 - PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 1, CHLOROPLASTIC outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGTCGCACCCAATCCCTGACACGGGCACCATAACTCCGTAAACGCCAC
Internal bar code:GCCGTTGTAAGTATTCTACGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:237
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCGGATGGGTGCAATTGT
Suggested primer 2:CCCTTCCAGTAGGCAGTGTG