Insertion junction: CLIP2.053494_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.053494
Chromosome:chromosome 10
Location:6528477
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g465400 (1 of 1) IPR026305 - Negative elongation factor A intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGGTCAGTGCCTGCAGGCTCTGTGACTCATGCGCTCCGACCCCGACC
Internal bar code:TCGTCATCACTGATCAATTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:409
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTACACCCCCTCCTCCAC
Suggested primer 2:GAGTCTGCAAAAGCCAGCAC