Insertion junction: CLIP2.053498_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.053498
Chromosome:chromosome 10
Location:2861400
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g439400 GAT1 Glutamyl tRNA amidotransferase, subunit A; (1 of 1) K02433 - aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A (gatA, QRSL1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGCCCTCCCTTGCCACCCAAGCCCACCACACAGCCCCGCCCCGCTTCC
Internal bar code:TCCCACCTGCCACTAATGGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1124
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCCGTCTCCATTCCTTT
Suggested primer 2:TAGCCCCCTACTCTCAACCC