Insertion junction: CLIP2.053505_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053505
Chromosome:chromosome 16
Location:2483924
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00177735

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACACGCATCCATCTGACCCCTCACCGTAGCCACCCGTACGATGCACG
Internal bar code:AAAGCGCGAAAGCCAGCTGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3294
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCACATGGATCCAGGATA
Suggested primer 2:CTGCAGGCAGGCTCTTACTT