Insertion junction: CLIP2.053506_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.053506
Chromosome:chromosome 17
Location:5565192
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739600 (1 of 1) PF03988 - Repeat of Unknown Function (DUF347) (DUF347) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGCCATGGGCACCGCCGTGGGAGACGGCATCTCAGAGGCCTGGGACA
Internal bar code:GCTAGTGCCTATGGGGGTTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:323
LEAP-Seq percent confirming:10.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAAGTGGACTGCATCAGC
Suggested primer 2:GCTCTGGATCGAGGTACGTG