Insertion junction: CLIP2.053514_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.053514
Chromosome:chromosome 6
Location:5548307
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g287000 (1 of 1) PTHR31495//PTHR31495:SF0 - FAMILY NOT NAMED // PEROXYGENASE 1-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCTGGGGATGGTGTATGGGTCGGCGGATGGAAGGAGGTGCATGTAAGG
Internal bar code:CCGCTGATTTCAGTAGTAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1107
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTACTCCTTGCGCTCTAG
Suggested primer 2:AGCAAAGGCAGATGAGGCAT