Insertion junction: CLIP2.053515_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.053515
Chromosome:chromosome 13
Location:5196978
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g607500 KU70 ATP-dependent DNA helicase 2 subunit KU70; (1 of 1) K10884 - ATP-dependent DNA helicase 2 subunit 1 (XRCC6, KU70, G22P1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAAAGGGATGAAAGGAGGGGGATGGGGCATGCTCCCAGGGGCATCCAG
Internal bar code:TAGGGTAATAAGCGAGAGCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:126
LEAP-Seq percent confirming:17.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGGGAGGGTTTAGTGTGG
Suggested primer 2:GGAAAACAGCCAGCTCCTCT