Insertion junction: CLIP2.053521_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.053521
Chromosome:chromosome 2
Location:1162472
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g081176 (1 of 6) IPR001537//IPR029028 - tRNA/rRNA methyltransferase, SpoU type // Alpha/beta knot methyltransferases intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGCTGACCAGGCTGTGGGGTGGCATTGGATGTGCAGGCGCACAGGTG
Internal bar code:GGCCACAGTTGGCTGGTTCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1511
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGAGGAAGCCGATGAGG
Suggested primer 2:TGCTCTGTGCTTCTCGACAG