Insertion junction: CLIP2.053528_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.053528
Chromosome:chromosome 12
Location:3393704
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g497950 (1 of 1) PTHR10706 - F-BOX FAMILY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGGTCGCAATGCAGGAGGGAGGCTCGCGCAGCTCCGTCACCCGCTGGG
Internal bar code:ATAATCAGTTAACTGATCTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1078
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGCAGGTTTCCACTAGG
Suggested primer 2:AGAAGAAGGAGTGGCGGTTG