Insertion junction: CLIP2.053530_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053530
Chromosome:chromosome 4
Location:3721543
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g229226 (1 of 1) IPR015943//IPR017986 - WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAAACTTCCCCCCCCCCGCCCCCGCGCTCTCGGGCCGGAATAGGGATT
Internal bar code:TTTCTACAGCTGCACGGTCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:527
LEAP-Seq percent confirming:31.8182
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AACCTTCGCCCTGAACCAAA
Suggested primer 2:GAGAACAGGCAGTGGAGGAC