Insertion junction: CLIP2.053531_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053531
Chromosome:chromosome 10
Location:1176283
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425800 ORN1 (1 of 1) 3.1.13.3 - Oligonucleotidase; Putative organellar oligoribonuclease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCATCGCCTTCTTTCTACCGGTTTGCGGGATGTTTTGCTGGGAACCCGG
Internal bar code:GGGTTTGCTGTTAGGCACTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3948
LEAP-Seq percent confirming:87.8788
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCGGATTCTCTAGCTTGC
Suggested primer 2:CTACATCCAGACGTCTCCGC