Insertion junction: CLIP2.053533_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053533
Chromosome:chromosome 1
Location:674071
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003751 (1 of 6) IPR000595//IPR005821//IPR018490 - Cyclic nucleotide-binding domain // Ion transport domain // Cyclic nucleotide-binding-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCACAACCGCAGCCGTACTTCCAGCCTGTACGGCGACCCCGCCGTGCC
Internal bar code:AATGTGTTATTGTACTAGAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2006
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTACCCCTTCAGTGGCTG
Suggested primer 2:GCTCAATTGAGATGCTGGCG