Insertion junction: CLIP2.053538_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053538
Chromosome:chromosome 6
Location:2359446
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATTTAACTCACAGCTTTCTTTTTTTTCAATTAACCGAACTCATCTGAA
Internal bar code:GATGACTTGGGTCAACACGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2780
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TGATCACGAGAAGCGCACTT
Suggested primer 2:ACACCGAGTTTTGTTGGGGT