Insertion junction: CLIP2.053542_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053542
Chromosome:chromosome 15
Location:605786
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g636600 FAP391 (1 of 8) PF00560 - Leucine Rich Repeat (LRR_1); Flagellar Associated Leucine Rich Repeat Protein 391 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACGCGTAGCTGAGCCCGTGTGTGCCCCCGCTACGTCCTGTTCCTGCTC
Internal bar code:GTACGGTGATTGAAGGGGCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1279
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGGCTGTTCTCTTCCATT
Suggested primer 2:TCCCGTGATGTGTGACTGTG