Insertion junction: CLIP2.053583_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.053583
Chromosome:chromosome 2
Location:4233703
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g104400 (1 of 1) IPR000104//IPR005033 - Antifreeze protein, type I // YEATS CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGTGATAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
Internal bar code:TGTATAGTGGAATTATAGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1321
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCGCTGACTACTCTATGT
Suggested primer 2:CAAGCGATGCAGAACATGGG