Insertion junction: CLIP2.053585_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.053585
Chromosome:chromosome 3
Location:8858135
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205809 (1 of 1) PF01367//PF02739 - 5'-3' exonuclease, C-terminal SAM fold (5_3_exonuc) // 5'-3' exonuclease, N-terminal resolvase-like domain (5_3_exonuc_N) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCTCTAGCACTCGGGCGGCTGGCCTGCGCGGGCGGAAGCATGCCCCC
Internal bar code:CAGTAAGTTCTAAACTAGTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1790
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CCCATCCACCTATGCCCATC
Suggested primer 2:CTGCATCGTTGGAATGCTGG