Insertion junction: CLIP2.053586_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.053586
Chromosome:chromosome 1
Location:3549380
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023100 (1 of 6) IPR001471//IPR016177 - AP2/ERF domain // DNA-binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCAGACGGCGCCGCGCTGCCGCTGCGCCCGCCGCGGCCGCCGCCGCCG
Internal bar code:CATTCGAGCAGTTCTTGGTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1082
LEAP-Seq percent confirming:38.0952
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAGAGCTAGCCATGGAGC
Suggested primer 2:CAGGCCGTGTTCACAAACAG