Insertion junction: CLIP2.053606_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053606
Chromosome:chromosome 1
Location:1690487
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g009325 (1 of 2) 1.14.11.18 - Phytanoyl-CoA dioxygenase / Phytanoyl-CoA hydroxylase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGTAACGCCTACACGGCAATCCCTACGACGCGCCCGCGAGTGCCCTC
Internal bar code:CAGCGCGATCTTTGTAGCTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:625
LEAP-Seq percent confirming:15.7895
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:48
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGTGAGTGTTGCACATG
Suggested primer 2:CGCGAATTTCCCGTTGATCC