Insertion junction: CLIP2.053606_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053606
Chromosome:chromosome 10
Location:6690510
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g466550 TF2H1 General transcription factor IIH subunit 1; (1 of 1) IPR005607//IPR027079 - BSD domain // TFIIH subunit Tfb1/p62 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAGCGGGCAGCCCCGGGAAAGTAAAGACGAGCCGTCACGGAAGCACC
Internal bar code:TAACTTGGGTAGGGTCGATGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:937
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GTACAGGGCCTTGAGGTCAC
Suggested primer 2:CCACTACAAGCACCACTCGT