Insertion junction: CLIP2.053607_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053607
Chromosome:chromosome 10
Location:1322191
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427453 CDS
lncRNA_TCONS_00060962 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCGAAACAGGGTGCAGGTTAGCTGGGTGAGCGGCGTGGCACTTCAGG
Internal bar code:ATCTATCTCATTTGATTTAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4978
LEAP-Seq percent confirming:97.8723
LEAP-Seq n confirming:92
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:94

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGCTATACATTGAGGGCT
Suggested primer 2:CGCCAGAAGCTGTAGGTGAA