Insertion junction: CLIP2.053607_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.053607
Chromosome:chromosome 10
Location:1322195
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427453 CDS
lncRNA_TCONS_00060962 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTGTTCTCGGAGATCCTCCTCAGCGTAGCTGGGCGCGACTGTCGCGG
Internal bar code:ATCTATCTCATTTGATTTAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1652
LEAP-Seq percent confirming:63.1579
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCAGAAGCTGTAGGTGAA
Suggested primer 2:GCGGCTATACATTGAGGGCT