Insertion junction: CLIP2.053608_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.053608
Chromosome:chromosome 3
Location:6443701
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193250 (1 of 1) 2.7.1.160 - 2'-phosphotransferase / Yeast 2'-phosphotransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCACGGGTGGCGGAAGCTATTTGTGCACGGGGTAGAGCAGCAGCCCGTG
Internal bar code:ATGATTGTTTTATTTAATGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:377
LEAP-Seq percent confirming:19.0476
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAATTGGTAGAACGCTCG
Suggested primer 2:CACCTCGGCCCACTTGTTAT