Insertion junction: CLIP2.053612_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053612
Chromosome:chromosome 6
Location:7906518
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304000 SRH14 (1 of 1) PTHR10799:SF580 - INTEGRATOR COMPLEX SUBUNIT 10-LIKE PROTEIN; SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGATGTTTACGATTTCCCCCCCCCCCCCGGCCTTCGTCACAGGTGCAC
Internal bar code:ATGACCTTTACTGGTGAACATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1691
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAGATCCATGCCCTCGTA
Suggested primer 2:CGTCAGAAGGTGGGCATTCT