Insertion junction: CLIP2.053612_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053612
Chromosome:chromosome 6
Location:7906528
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304000 SRH14 (1 of 1) PTHR10799:SF580 - INTEGRATOR COMPLEX SUBUNIT 10-LIKE PROTEIN; SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACATCAACCCAAACTAAACCAAACCAAGCCAAACATAATCAAATTAGT
Internal bar code:AGAATATTTCAATTGGTGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:930
LEAP-Seq percent confirming:76.6667
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCAGAAGGTGGGCATTCT
Suggested primer 2:TCCAGATCCATGCCCTCGTA