Insertion junction: CLIP2.053614_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053614
Chromosome:chromosome 16
Location:3232988
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g665850 FAP248 Flagellar Associated Protein 248 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCGGAGTCAGGCGTGCAGGGGAAGGAAGGGCAGGTTGCCTAGCAGCAG
Internal bar code:GCACATTTGGAGACTAAATTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2503
LEAP-Seq percent confirming:11.7647
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:60
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:AGAACGGACAGCTCTGGTTG
Suggested primer 2:ATGCCACTGATGCCGTACAA