Insertion junction: CLIP2.053619_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053619
Chromosome:chromosome 6
Location:8457977
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g308650 (1 of 1) IPR003072//IPR003980//IPR005404 - Orphan nuclear receptor, NOR1 type // Histamine H3 receptor // Potassium channel, voltage dependent, Kv3.3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCGCCGCAGCCGCCAGCCCACGCCAGCCCGTAGCTGCACCCAAGCGTG
Internal bar code:ATCCAACAGGGTGATATAGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:420
LEAP-Seq percent confirming:47.8261
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGCCATCGTCATCACTT
Suggested primer 2:CGCAAGTCGCAACCCATATG