Insertion junction: CLIP2.053621_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053621
Chromosome:chromosome 3
Location:3958958
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171250 (1 of 1) IPR000104//IPR011989//IPR012677//IPR013083 - Antifreeze protein, type I // Armadillo-like helical // Nucleotide-binding alpha-beta plait domain // Zinc finger, RING/FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGCGACGGCGCGGCGAAGTGGCGGGGTGACCGGCTGCGACGCCAAAC
Internal bar code:ACAGGGCGTTGCCTCGCGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1351
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AAACCAACGAAAACGAGCGG
Suggested primer 2:GAGCGAGGGAGGGTTACATG