Insertion junction: CLIP2.053622_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053622
Chromosome:chromosome 4
Location:1844864
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217950 (1 of 1) PTHR24347//PTHR24349//PTHR24349:SF84 - SERINE/THREONINE-PROTEIN KINASE // SERINE/THREONINE-PROTEIN KINASE // CALCIUM-DEPENDENT PROTEIN KINASE 13 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATAACGCCAAGGTCATCGGTTCGATCCCGATACGGGCCATCCGTTTTG
Internal bar code:GGCATGGGAGGACCCTAATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:811
LEAP-Seq percent confirming:56.25
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCTGTACCTGCTGCTGAG
Suggested primer 2:CGAAGAGTACCTAGCCGCTG