Insertion junction: CLIP2.053623_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.053623
Chromosome:chromosome 2
Location:6153008
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g119850 PDE9 (1 of 3) 3.1.4.17//3.1.4.53 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase // 3',5'-cyclic-AMP phosphodiesterase / cAMP-specific phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCGGTGACGCCAAAACCTACGCGTCAGCAATCCCCTGCCTAAACACA
Internal bar code:GTTGATGATTCACCTCGAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:553
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCATCCTGTCCTTGCTCTGT
Suggested primer 2:GAAAGGGTGGACGTGTAGGG