Insertion junction: CLIP2.053627_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.053627
Chromosome:chromosome 3
Location:4365097
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g174800 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCTCTGCCTTGGCTCGGTCGGGTTCCGCCAGCTGCTGCAGCTCTGAGC
Internal bar code:GTATGTTGCTGGACGAAGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:610
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCTTTCCCTCTGCTGTGT
Suggested primer 2:ACTCCTCCATCCAGTCCTCC