Insertion junction: CLIP2.053632_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053632
Chromosome:chromosome 17
Location:3802908
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00162932

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGTCGCCCAAGGCGGCCGCGAGACAGCAGCTTGGCCCGTGCCACGCGA
Internal bar code:GCCTGGGCAGGCCGGGGTCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1842
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCATGGCTCATTCCATTG
Suggested primer 2:TGATTCGCCCGGAGTTAGTG