Insertion junction: CLIP2.053636_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.053636
Chromosome:chromosome 9
Location:1737979
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g398400 TRP5 Transient receptor potential ion channel protein; (1 of 46) PF00520 - Ion transport protein (Ion_trans) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGAAATCAGTGGCTGTTACAAATGTACATACCTGATCGCCTCCACCTC
Internal bar code:ATTGCTAAATTCGTTCATTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2516
LEAP-Seq percent confirming:7.40741
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGAGTCGCAGCATGAATG
Suggested primer 2:TGGTGTGTCGCAAAATGCAG