Insertion junction: CLIP2.053653_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053653
Chromosome:chromosome 14
Location:3669616
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g631200 IC97,FAP94,DII6 (1 of 1) K17580 - cancer susceptibility candidate protein 1 (CASC1); Flagellar Inner Arm Dynein I1/f intermediate chain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCCATACAGGGGGTTGAGAGGGGCGGTAGCTGTCCATGAAAACCGGGG
Internal bar code:CGCATGGTGGTCGATATTCCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:464
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCTCCCACCCGTTTCTCC
Suggested primer 2:CTGTCTTACGGGCGCTTGTA