Insertion junction: CLIP2.053654_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.053654
Chromosome:chromosome 16
Location:922113
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g648350 PDY2 (1 of 2) 1.5.5.2 - Proline dehydrogenase; Proline dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATGGAATGAGGCGGAAACGCGGGAACAAACGCTGGACAAGGTGCCGGC
Internal bar code:GGGATTGCAGCAAGGGCTTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:170
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCAAAAATGCAGTGCGA
Suggested primer 2:GTGTGCGTGTGTGTGTGTAC