Insertion junction: CLIP2.053664_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053664
Chromosome:chromosome 3
Location:6532119
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g194100 MAPKKK3 (1 of 1) PF14381 - Ethylene-responsive protein kinase Le-CTR1 (EDR1); Mitogen-Activated Protein Kinase Kinase Kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTCGCAGGTCCGCCAGCGCAGGGAACTGGTTGGGGCCCTCGCAAACCT
Internal bar code:TAGTGTGGGATTCAGGGGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1364
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCAAACGTCGCCGATAG
Suggested primer 2:GAACCGCTCACACACAACAC