Insertion junction: CLIP2.053676_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053676
Chromosome:chromosome 4
Location:3891499
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGATGCGCGCAGAGGGGTGAGGGGAGGGGAGGGGTGGCAGCCCGCAG
Internal bar code:GGCTCGTGATGTGTAGAAGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1196
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGCCTGGCCAAATCATA
Suggested primer 2:TTGCTTGACACATTTGGGCG