Insertion junction: CLIP2.053680_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.053680
Chromosome:chromosome 12
Location:6488391
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g537671 (1 of 1) PTHR10799//PTHR10799:SF677 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCTGATGACAAGACCCGCCTCCCCCCTCGGCCCCCTCGCCAGTGTCCT
Internal bar code:AATCCCTCGTTAGTTTAGCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:75
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCATGTTGAGGATGGGAA
Suggested primer 2:CCAACACCCTACATCACCCC