Insertion junction: CLIP2.053685_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053685
Chromosome:chromosome 2
Location:3989439
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102700 (1 of 3) PF11735 - Cryptococcal mannosyltransferase 1 (CAP59_mtransfer) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCTGGAGCCACGTGGTGCTGCTGGAGGCCAGCAGCGTGCAGTGGTCG
Internal bar code:CCACCGGTTGGAACAACTCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2544
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCTAGCGCGTTCTAGCA
Suggested primer 2:CAGCGGGCATGGATTTGATG