Insertion junction: CLIP2.053700_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053700
Chromosome:chromosome 12
Location:5913029
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533700 CYA12 Solute-binding protein-like adenylate cyclase; (1 of 3) IPR000104//IPR001054//IPR006059//IPR029787 - Antifreeze protein, type I // Adenylyl cyclase class-3/4/guanylyl cyclase // Solute-binding family 1 // Nucleotide cyclase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCCATGCGGCCGACAATCTCGCGCGCCAGCCATAACATAAACATAAAC
Internal bar code:TGTCTTCAGTGGGTCATCTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3528
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGGATGGTCATCTGGCC
Suggested primer 2:TGTTGCGCACCATGGAAAAG