Insertion junction: CLIP2.053706_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053706
Chromosome:chromosome 6
Location:1664074
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g262200 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGTGACAGATGCGCTTCCGTGGGTTGCACCTTCCCTGGCGCCTTCCTT
Internal bar code:GAGGGAGGAGGAGGAGAATAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2048
LEAP-Seq percent confirming:61.8182
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCGTCTACCCTGCCATTC
Suggested primer 2:CGCACTGACTGAGACTGTGT