Insertion junction: CLIP2.053707_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.053707
Chromosome:chromosome 6
Location:5014819
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g281766 (1 of 77) IPR001623 - DnaJ domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCCCGCTAACGTGTATCGGACAGTGTATGTTTGGCGACGTACGGTAC
Internal bar code:GGTTGGAGTACTTCCTCTGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3024
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAGTTTGGGAGAAAGGGC
Suggested primer 2:GAGTCCTGCTCAAATGGGCT